Carcinogenesis, Teratogenesis & Mutagenesis ›› 2021, Vol. 33 ›› Issue (4): 312-316.doi: 10.3969/j.issn.1004-616x.2021.04.013

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Evaluation of sample preservation solution for fecal DNA detection

LI Bo1, LI Gairui1, ZHAO Wei2, PENG Xiaolin1, ZHAO Dan1, PENG Ji3   

  1. 1. Department of Tumor, Injury and Nutrition, Shenzhen Nanshan Center for Chronic Disease Control, Shenzhen 518054;
    2. Hainan Center for Disease Control and Prevention, 570203;
    3. Department of Cancer Prevention and Treatment, Shenzhen Center for Chronic Disease Control, Shenzhen 518020, Guangdong, China
  • Received:2021-04-22 Revised:2021-06-17 Online:2021-07-30 Published:2021-07-29

Abstract: OBJECTIVE: To develope a solution which could be used for preserving DNA samples in fecal samples from individuals who participated in early colorectal cancer screening. METHODS: An original formula was modified for this investigation. Fecal samples were stored at room temperature for 3 and 7 days,and freezing and thawing at -80℃ within the 7 days. Then,agarose gel electrophoresis (the qualitative method) and real-time fluorescent quantitative PCR (qPCR,the semi-quantitative method) were used for detecting presence of the human housekeeping β-globin gene. Usefulness of our modified preservation solution wascompared to similar international preservation solutions using 501 of the fecal samples. RESULTS: The agarose gel electrophoresis band did not change significantly after the fecal samples were stored at room temperature for 3 and 7 days. The qPCR results as measured using the ΔCt value were less than or equal to 0.2. After freezings and thawings,the agarose gel electrophoresis results remained the same and ΔCt value for the qPCR results was less than 1. Compared with the international preservation solutions,our solution showed more clear bands and less changes of the ΔCt value. Using our solution,effectiveness in preserving fecal samples for DNA analysis was >70% compared to <40% if no preservation solutions were used. CONCLUSION: Our data indicate that our preservation solution was both economical and effective in preserving fecal samples after cold-chain transportation and in inhibiting proliferation of microorganisms. Our solution is therefore useful for use in large-scale colorectal cancer screening.

Key words: feces, sample preservation solution, fecal DNA, colorectal cancer, early screening

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