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利用IdentifilerTM体系中D21S11基因座对唐氏综合征的预测分析

张丹妍1,张丹媚2,马明福1,吕 静1,李新生1,杨玉有1,李练兵1,*   

  1. ( 1. 重庆市人口和计划生育科学技术研究院,出生缺陷与生殖健康重庆市市级重点实验室,重庆市正鼎司法鉴定所,重庆 400020;2. 重庆房地产职业学院,重庆 401331 )
  • 收稿日期:2013-04-12 修回日期:2013-07-07 出版日期:2013-09-30 发布日期:2013-09-30
  • 通讯作者: 李练兵,E-mail:lilianbing677@163.com
  • 作者简介: 重庆市人口和计划生育科学技术研究院科技项目(院1102,院1206),出生缺陷与生殖健康重庆市重点实验室开放课题(院1109)
  • 基金资助:

     重庆市人口和计划生育科学技术研究院科技项目(院1102,院1206),出生缺陷与生殖健康重庆市重点实验室开放课题(院1109)

The predictive analysis of Down's syndrome using the D21S11 locus in IdentifilerTM system

ZHANG Dan-yan1ZHANG Dan-mei2,MA Ming-fu1,LU Jing1,LI Xin-sheng1,YANG Yu-you1,LI Lian-bing1,*   

  1. (1. Chongqing Institute of Population and Family Planning, Key Laboratory of Birth Defects and Reproductive Health, Chongqing Zheng-ding Judicial Identification Institute, Chongqing 400020; 2. Chongqing Real Estate College, Chongqing 401331, China)
  • Received:2013-04-12 Revised:2013-07-07 Online:2013-09-30 Published:2013-09-30
  • Contact: LI Lian-bing,E-mail:lilianbing677@163.com

摘要:

目的: 利用IdentifilerTM体系中D21S11基因座对唐氏综合征进行预测分析。方法:采用法医学DNA亲权鉴定常用的IdentifilerTM试剂盒对5例唐氏综合征病例及4个疑似唐氏综合征病例家庭11个样本进行PCR扩增,扩增产物用ABI 3130 DNA全自动测序仪分型判断。通过计算待测家庭的累积亲权指数确认亲缘关系后,对三体基因座的峰数及峰值面积比进行分析。当STR基因座出现3个等位基因荧光峰,峰值面积比值为1∶1∶1 时;或出现两个等位基因荧光峰,峰值面积比为2∶1或1∶2;或出现峰值面积比未达到2∶1/1∶2,但<0.65 或者>1.8 时,预测患有唐氏综合征。结果:D21S11基因座具有高度的多态信息。确诊的5名唐氏患儿的检测结果与染色体结果一致,待测的4个家庭11个样本中10个样本检测结果与染色体结果一致,1个样本出现假阴性结果。结论:IdentifilerTM试剂盒中D21S11基因座对唐氏综合征的检测有简便、快速、直接的特点,检验效果较好,但存在假阴性结果,今后研究将扩大样本检测量及21号染色体上检测基因座数量,提高检测准确率。

关键词: D21S11, 基因座, 短串联重复序列, 聚合酶链式反应, 唐氏综合征

Abstract:

 OBJECTIVE: We used the D21S11 loci in the IdentifilerTM system analysis to predict Down’s syndrome. METHODS:Eleven samples of 5 confirmed and 4 suspected cases of Down’s syndrome family were amplified by the common IdentifilerTM kit in forensic DNA paternity identification,and their products were analyzed by ABI3130 DNA automatic sequencer. After the family cumulative paternity indexes were calculated to confirm their phylogenetic relationship,the three body loci of peak number and peak area ratio were analyzed. When there were three STR loci alleles fluorescence peak ( peak area ratio of 1∶1∶1) or two alleles fluorescence peak (peak area ratio of 2∶1 or 1∶2 or peak area ratio had not reached 2∶1/1:2,but <0.65 or > 1.8),Down’s syndrome could be predicted . RESULTS: D21S11 locus contained highly polymorphic information. The detection results were consistent with the results of chromosome karyotype in five children diagnosed with Down's syndrome. The detection results of 10 samples in the four measured families with 11 samples were consistent with the results of chromosome karyotype and 1 sample being false negative. CONCLUSION:The IdentifilerTM kit D21S11 loci in the detection of Down’s syndrome had the characteristics of being simple fast,direct and the test effect was good,but there were false negative results. Future research will expand samples size and the number of loci detected on chromosome 21,to improve the accuracy.

Key words: D21S11, locus, short tandem repeat, polymerase chain reaction, Down's syndrome