癌变·畸变·突变 ›› 2002, Vol. 14 ›› Issue (2): 71-074.doi: 10.3969/j.issn.1004-616x.2002.02.002

• 论著 • 上一篇    下一篇

利用反向mRNA 斑点印迹从抑制消减杂交阳性克隆中筛选差异表达基因

李恩民1;许丽艳2 杨 帆1;袁 兰3; 陈 跃3   

  1. 1. 汕头大学医学院生物化学与分子生物学教研室,广东 汕头 515031 ; 2. 汕头大学医学院肿瘤病理研究室,广东 汕头 515031 ;  3. 北京大学医药卫生分析中心,北京 100083
  • 收稿日期:2001-08-10 修回日期:2001-09-03 出版日期:2002-04-30 发布日期:2002-04-30
  • 通讯作者: 李恩民

SCREENING DIFFERENTIALLY EXPRESSED GENES FROM SUPPRESSION SUBTRACTIVE HYBRIDIZATIONAL POSITIVE CLONES USING REVERSE mRNA DOT BLOT TECHNIQUE

LI En-min; XU Li-yan; YANG Fan; etal   

  1. Biochemistry and Molecular Biology Department , Shantou University Medical College , Shantou 515031 ,China
  • Received:2001-08-10 Revised:2001-09-03 Online:2002-04-30 Published:2002-04-30
  • Contact: LI En-min

摘要: 目的: 建立一种从抑制消减杂交阳性克隆中筛选差异表达基因的方法。方法:以阵列方式将抑制消减杂交阳性克隆的PCR 产物点加于尼龙膜上,以标记polyA+ RNA 为探针进行反向杂交,化学发光法检测,在图象分析仪上进行光密度扫描,计 量平均单位面积光密度,扣除背景,计算两个阵列各对应点之间光密度值的比值R(ratio) 。差异表达基因的阳性判定标准为R 值大于或等于2. 00 。结果:通过反向mRNA 斑点印迹技术可以从抑制消减杂交阳性克隆中把差异表达基因有效地筛选出来。结论:反向mRNA 斑点印迹技术是一种筛选抑制消减杂交差异表达基因的有效方法。

关键词: 抑制消减杂交, 基因克隆, 差异表达基因, 反向mRNA 斑点印迹, 筛选

Abstract: Purpose : To establish a method for screening the differential expression genes from the suppression subt ractive hybridization positive clones. Methods : The PCR products of suppression subtractive hybridization positive clones were arrayed onto nylon membrane , hybridized with a labelled polyA + RNA probe and investi- gated with chemical luminescence reagent . The intensity of the dots was scanned and analyzed using Leica Q550 Iw image analysis system. The intensity of the dots were calculated as average intensity per unit area which eliminates the intensity of background. If the ratio (R) of intensity of a pair of dots in two parallel arrays is ≥ 2. 00 , it is defined to be positive differential expression gene. Results : The differential expression genes are efficaciously screened f rom suppression subtractive hybridization positive clones using reverse mRNA dot blot technique. Conclusion : The reverse mRNA dot blot is a useful method for screening differential expression genes from suppression subtractive hybridization positive clones.

Key words: suppression subtractive hybridization, gene clone, differential expression gene, reverse mRNA dot blot screen

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