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γ射线诱导大鼠外周血淋巴细胞差异表达基因及相关通路的研究

李建国1,秦秀军1,袁  慧1,张  伟1,周晋源2,闻建华1   

  1. ( 1. 中国辐射防护研究院放射医学与环境医学研究所,山西  太原  030006;2. 中国辐射防护研究院附属医院,山西  太原  030006 )
  • 收稿日期:2013-09-05 修回日期:2013-09-26 出版日期:2013-11-30 发布日期:2013-11-30
  • 通讯作者: 李建国,E-mail:Ljg2547@163.com
  • 作者简介:李建国 (1976- ),男,山西省运城市人,副研究员,博士研究生,研究方向:辐射生物效应。E-mail:Ljg2547@163.com
  • 基金资助:

    山西省实验动物科研专项[2010 (k05)]

Differential gene expression and related pathways of rat lymphocytes induced by γ ray

LI Jian-guo1,QIN Xiu-jun1,YUAN Hui1,ZHANG Wei1,ZHOU Jin-yuan2,WEN Jian-hua1   

  1. (1. Department of Radiation Medicine and Environment Medicine, China Institute for Radiation Protection, Taiyuan 030006; 2. The Affiliated Hospital of China Institute for Radiation Protection, Taiyuan 030006, Shanxi, China)
  • Received:2013-09-05 Revised:2013-09-26 Online:2013-11-30 Published:2013-11-30
  • Contact: LI Jian-guo,E-mail:Ljg2547@163.com

摘要:

 目的: 为在分子水平上研究外周血淋巴细胞辐射生物剂量估算和辐射损伤机制提供依据。方法:利用全基因组芯片技术对大鼠离体外周血淋巴细胞经2.0 Gyγ射线照后不同时间点 (6、12、24 h)的差异基因表达谱和通路进行分析,并利用荧光定量PCR技术对基因芯片结果进行验证。结果:与未经照射的淋巴细胞比较,照后6 h差异表达基因有534个,其中上调差异基因332个,下调差异基因202个;照后12 h 差异表达基因有2 001个,其中上调差异基因1 258个,下调差异基因743个;照后24 h差异表达基因有6 925个,其中上调差异基因2 814个,下调差异基因4 111个;照后3个时间点共同差异表达基因有270个,其中上调差异基因143个,下调差异基因127个。另外在差异表达基因分析的基础上,发现照后6 h时差异表达基因涉及到的通路有27个,照后12 h时差异表达基因涉及到的通路有22个,照后24 h时差异表达基因涉及到的通路有41个。RT-PCR结果表明,Trmt61a、Tlr3及Enc1 3个差异表达基因的相对定量结果与基因芯片检验结果表达趋势一致。结论:随着照后时间延长,辐射诱导大鼠离体外周血淋巴细胞差异表达基因有增多趋势,且筛选出的通路也明显不同,表明照后不同时间辐射引起的损伤可能不同。

关键词: γ射线, 大鼠, 淋巴细胞, 基因芯片, 差异表达基因

Abstract:

 OBJECTIVE: To provide the basis for studies on the biological dose estimation of peripheral blood lymphocyte in molecular level and the mechanism of radiation injury. METHODS:Using whole genome microarray technology,the gene expression profiles and the pathways of the rat peripheral blood lymphocytes were studied 6,12,24 h after irradiated by 2.0 Gy γ ray. The results were verified by fluorescence quantitative PCR technology. RESULTS:At 6 h,there were 534 differentially expressed genes,of which 332 genes were up-regulated and 202 genes down-regulated. At 12 h,there were 2 001 differentially expressed genes,of which 1 258 were up-regulated and 743 down-regulated. At 24 h,there were 6 925 differentially expressed genes,of which 2 814 were up-regulated and 4 111 down-regulated. There were 270 common differentially expressed genes at three time points,of which 143 were up-regulated and 127 genes down-regulated. In the analysis of differentially expressed genes,27 pathways were related to the differentially expressed genes at 6 h,22 pathways related at 12 h,and 41 pathways related at 24 h. The relative quantitative results of RT-PCR were consistent with the results of gene chip test in Trmt61a,Tlr3 and Enc1 genes. CONCLUSION:The differentially expressed genes of rat peripheral blood lymphocytes increased time after irradiation,and the screened pathways were also different. The mechanisms involved in radiation injury were also different  at various time poins after irradiation.

Key words: &gamma, ray, rat, lymphocyte, gene chip, differential expression gene